Basic Information
Locus ID:
CH06.2663
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
C-terminus of AA_permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 33472421 | 33477929 | - | CH06.2663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 111,976.96 Da | 41.79 | 96.21 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 520 | 570 | 3.4E-17 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 81 | 492 | 3.4E-42 | IPR002293 |
| SUPERFAMILY | SSF81383 | F-box domain | 623 | 669 | 9.55E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 613 | 704 | 3.6E-5 | - |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 76 | 504 | 3.6E-92 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 622 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 9.51E-294 |
| RefSeq | XP_025798024.1 | cationic amino acid transporter 1 [Panicum hallii] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 9.11E-293 | |
| TrEMBL | A0A1E5VME9 | Cationic amino acid transporter 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0012678 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology