Basic Information
Locus ID:
CH06.2625
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 33174536 | 33178058 | + | CH06.2625 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 41,327.87 Da | 29.81 | 80.37 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 74 | 346 | 1.23402E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 69 | 346 | 1.2E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 346 | 2.6E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 149 | 4.6E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 355 | 9.8E-61 | - |
| SMART | SM00220 | serkin_6 | 68 | 349 | 2.8E-60 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 3 | 354 | 1.6E-54 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 349 | 41.163166 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 207 | 225 | 4.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 169 | 182 | 4.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 273 | 295 | 4.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 317 | 339 | 4.7E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 2.99E-208 |
| RefSeq | XP_004982354.1 | serine/threonine-protein kinase HT1 [Setaria italica] | 1.43E-276 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 1.37E-180 | |
| TrEMBL | K4ABD4 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101762013 PE=4 SV=1 | 3.24E-275 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology