Basic Information
Locus ID:
CH06.2585
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 32824233 | 32833296 | - | CH06.2585 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 67,775.92 Da | 41.93 | 92.04 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 103 | 162 | 8.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 338 | 605 | 1.2E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 610 | 1.68E-44 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 76 | 210 | 6.43E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 219 | 5.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 410 | 1.1E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 411 | 630 | 1.5E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 335 | 610 | 25.5875 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 611 | 646 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 8.91E-121 |
| RefSeq | XP_025812780.1 | pollen receptor-like kinase 4 [Panicum hallii] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 8.62E-120 | |
| TrEMBL | A0A2T7DVL1 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G056600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology