Basic Information
Locus ID:
CH06.2573
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 32734878 | 32741295 | + | CH06.2573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 84,795.73 Da | 49.55 | 88.97 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 146 | 205 | 1.2E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 504 | 772 | 2.6E-31 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 772 | 7.83E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 240 | 2.25E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 782 | 5.1E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 474 | 575 | 2.3E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 259 | 3.4E-40 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 499 | 775 | 28.923124 | IPR000719 |
| PRINTS | PR01217 | Proline rich extensin signature | 253 | 269 | 9.2E-12 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 446 | 471 | 9.2E-12 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 273 | 285 | 9.2E-12 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 287 | 308 | 9.2E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 427 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 9.76E-157 |
| RefSeq | XP_039807793.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Panicum virgatum] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 9.43E-156 | |
| TrEMBL | A0A3L6S1M0 | Protein STRUBBELIG-RECEPTOR FAMILY 3-like OS=Panicum miliaceum OX=4540 GN=C2845_PM09G20700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology