Basic Information
Locus ID:
CH06.2534
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 32357445 | 32362757 | + | CH06.2534 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 45,832.21 Da | 40.26 | 81.20 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 50 | 318 | 6.87204E-101 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 47 | 317 | 2.7E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 318 | 1.2E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 122 | 1.5E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 123 | 327 | 1.8E-58 | - |
| SMART | SM00220 | serkin_6 | 44 | 317 | 1.3E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 328 | 35.043144 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 72 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 384 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.2 | - | 7.48E-110 |
| RefSeq | XP_004965690.1 | PTI1-like tyrosine-protein kinase At3g15890 [Setaria italica] | 1.12E-260 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 1.91E-104 | |
| TrEMBL | A0A1E5VU50 | PTI1-like tyrosine-protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0010365 PE=3 SV=1 | 5.8E-260 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology