Basic Information
Locus ID:
CH06.2525
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 32287643 | 32290157 | + | CH06.2525 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 62,975.40 Da | 50.92 | 76.14 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 342 | 568 | 1.5E-72 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 90 | 302 | 1.7E-82 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 98 | 571 | 2.0E-224 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 360 | 534 | 2.0E-224 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 1.65E-203 |
| RefSeq | XP_025812230.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X2 [Panicum hallii] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 1.59E-202 | |
| TrEMBL | A0A2S3HHW9 | ribonuclease P OS=Panicum hallii OX=206008 GN=PAHAL_4G062000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology