Basic Information
Locus ID:
CH06.2407
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 31125970 | 31127410 | + | CH06.2407 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 44,946.45 Da | 55.27 | 78.02 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 112 | 359 | 1.93917E-121 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 107 | 359 | 5.9E-65 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 359 | 1.35E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 188 | 381 | 9.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 94 | 187 | 2.2E-21 | - |
| SMART | SM00220 | serkin_6 | 105 | 366 | 4.4E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 105 | 373 | 40.823952 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 227 | 239 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 286 | 308 | 3.2E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 183 | 196 | 3.2E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 221 | 239 | 3.2E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 330 | 352 | 3.2E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 267 | 277 | 3.2E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 9.8E-182 |
| RefSeq | XP_039807447.1 | serine/threonine/tyrosine-protein kinase HT1-like [Panicum virgatum] | 4.33E-277 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 9.4E-181 | |
| TrEMBL | A0A8T0TE11 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG244800 PE=4 SV=1 | 9.79E-276 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology