Basic Information
Locus ID:
CH06.2396
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 31048092 | 31053481 | - | CH06.2396 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 77,219.48 Da | 36.90 | 92.67 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 418 | 689 | 1.05891E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 2.2E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 141 | 161 | 0.92 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 686 | 2.4E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 686 | 1.66E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 238 | 1.7E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 489 | 3.8E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 256 | 1.2E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 707 | 1.2E-57 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 141 | 163 | 7.33462 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 689 | 37.007771 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 2.61E-211 |
| RefSeq | XP_004965804.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Setaria italica] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 2.51E-210 | |
| TrEMBL | K3XVJ0 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101779067 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology