Basic Information
Locus ID:
CH06.2266
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 29463027 | 29467499 | - | CH06.2266 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 67,153.02 Da | 63.05 | 60.34 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 429 | 513 | 4.7E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 615 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 542 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 416 | - | - |
| Coils | Coil | Coil | 444 | 474 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 1.03E-47 |
| RefSeq | XP_025811445.1 | protein WVD2-like 5 [Panicum hallii] | 1.16E-204 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 1.02E-46 | |
| TrEMBL | A0A2T8JCB7 | TPX2 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_4G088300 PE=3 SV=1 | 2.63E-203 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology