Basic Information
Locus ID:
CH06.2106
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 27556343 | 27561579 | + | CH06.2106 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 52,388.31 Da | 46.67 | 87.74 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 142 | 425 | 2.5E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 130 | 437 | 3.69E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 234 | 453 | 1.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 213 | 1.6E-28 | - |
| SMART | SM00220 | serkin_6 | 141 | 430 | 2.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 141 | 437 | 40.159653 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 147 | 170 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 281 | 293 | - | IPR008271 |
| Coils | Coil | Coil | 420 | 440 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23270.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 19. Encodes a cysteine-rich receptor-like protein kinase. | 8.98E-54 |
| RefSeq | XP_039805048.1 | homeodomain-interacting protein kinase 2-like [Panicum virgatum] | 4.49E-128 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 8.81E-53 | |
| TrEMBL | A0A8T0T8T7 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG211996 PE=4 SV=1 | 3.06E-158 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH06.2071, CH06.2106 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G222400, gene-BS78_K043500 |