Basic Information
Locus ID:
CH06.2098
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 27370569 | 27376389 | + | CH06.2098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 62,444.74 Da | 49.23 | 86.80 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 38 | 189 | 8.6E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 188 | 1.39E-38 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 112 | 4.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 236 | 1.9E-16 | - |
| SMART | SM00220 | serkin_6 | 37 | 279 | 4.3E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 313 | 20.739538 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 66 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04500.2 | - | 1.13E-29 |
| RefSeq | XP_025813007.1 | uncharacterized protein LOC112890309 [Panicum hallii] | 9.56E-110 |
| Q9XEC7 | Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana OX=3702 GN=CRK37 PE=3 SV=1 | 2.59E-28 | |
| TrEMBL | A0A2T8JCK2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_4G107500 PE=3 SV=1 | 2.98E-112 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH06.2098.