Basic Information
Locus ID:
CH06.2028
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 26489061 | 26492313 | + | CH06.2028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 112,540.32 Da | 41.78 | 95.35 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 705 | 989 | 2.07406E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 303 | 362 | 5.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 513 | 574 | 1.8E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 702 | 987 | 4.0E-39 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 2.5E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 355 | 604 | 6.75E-36 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 411 | 1.5E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 988 | 7.69E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 1004 | 1.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 554 | 1.1E-62 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 684 | 790 | 3.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 202 | 301 | 1.4E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 201 | 6.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 555 | 613 | 3.0E-11 | IPR032675 |
| SMART | SM00220 | serkin_6 | 699 | 994 | 1.4E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 254 | 278 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 131 | 155 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 130 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 536 | 560 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 325 | 348 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 205 | 229 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 349 | 373 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 302 | 324 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 988 | 36.018391 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 134 | 147 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 536 | 549 | 2.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1011 | 1038 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 2.87E-108 |
| RefSeq | XP_039806376.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Panicum virgatum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 1.37E-72 | |
| TrEMBL | A0A3L6PFC2 | Receptor-like protein kinase 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G14480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology