Basic Information
Locus ID:
CH06.2009
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 26205209 | 26214082 | + | CH06.2009 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 133,741.70 Da | 49.01 | 81.74 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16796 | Microtubule binding | 633 | 769 | 7.6E-38 | IPR031852 |
| Pfam | PF00225 | Kinesin motor domain | 779 | 940 | 4.5E-58 | IPR001752 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 13 | 123 | 9.56E-6 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 648 | 980 | 1.81E-106 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 590 | 775 | 5.3E-46 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 776 | 972 | 3.8E-67 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 12 | 132 | 3.8E-9 | IPR036872 |
| SMART | SM00129 | kinesin_4 | 646 | 950 | 7.6E-130 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 13 | 127 | 12.729988 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 648 | 942 | 89.909561 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 843 | 861 | 2.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 892 | 913 | 2.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 723 | 744 | 2.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 812 | 829 | 2.8E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1183 | 1200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1150 | 1166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1126 | 1208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 986 | 1066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 999 | 1018 | - | - |
| Coils | Coil | Coil | 956 | 983 | - | - |
| Coils | Coil | Coil | 628 | 648 | - | - |
| Coils | Coil | Coil | 389 | 409 | - | - |
| Coils | Coil | Coil | 515 | 560 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.2 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 9.07E-237 |
| RefSeq | XP_012701148.2 | kinesin-like protein KIN-14M isoform X1 [Setaria italica] | 0 |
| B9FTR1 | Kinesin-like protein KIN-14M OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14M PE=2 SV=2 | 0 | |
| TrEMBL | A0A368QVI6 | Calponin-homology (CH) domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_4G181400v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology