HalophFGD

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Basic Information
Locus ID: CH06.1542
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH06 15957614 15959938 - CH06.1542
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.06 50,760.25 Da 62.39 85.33 -0.45
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 202 279 - -
MobiDBLite mobidb-lite consensus disorder prediction 175 279 - -
Coils Coil Coil 422 456 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051209483.1 uncharacterized protein LOC127326737 [Lolium perenne] 7.0E-18
TrEMBL B8BCB5 C3H1-type domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29829 PE=4 SV=1 2.91E-92
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 45 AH01.1738, AH01.1924, AH02.1406, AH02.1839, AH04.1107 ...
AH04.2291, AH05.1513, AH05.207, AH05.2637, AH06.104, AH08.1514, BH01.746, BH02.1865, BH04.1204, BH04.727, BH04.944, BH05.2107, BH05.3460, BH07.224, BH09.342, BH09.988, CH01.2970, CH01.4685, CH02.1861, CH03.2041, CH03.3265, CH04.2574, CH04.496, CH05.2592, CH05.3232, CH06.1542, CH06.747, CH07.2475, CH07.3213, CH07.921, CH08.1220, CH08.1238, CH08.1267, CH08.1830, CH08.2703, CH08.422, CH09.1881, CH09.996, Contig2112.1, Contig2139.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.