Basic Information
Locus ID:
CH06.1483
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 14765050 | 14768258 | + | CH06.1483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 57,967.25 Da | 33.04 | 109.68 | 0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 30 | 445 | 5.9E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 147 | 199 | 2.5E-15 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 100 | 114 | 2.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 155 | 165 | 2.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 86 | 97 | 2.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 115 | 123 | 2.0E-9 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 3.34E-239 |
| RefSeq | XP_004965335.1 | sodium/hydrogen exchanger 4 [Setaria italica] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 3.2E-238 | |
| TrEMBL | A0A4U6V342 | Na_H_Exchanger domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_4G177000v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology