Basic Information
Locus ID:
CH06.1299
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 12113489 | 12116741 | + | CH06.1299 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 68,523.81 Da | 40.52 | 93.63 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 306 | 571 | 1.5E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 1.2E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 183 | 2.1E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 575 | 1.78E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 197 | 8.93E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 274 | 381 | 4.9E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 9.1E-55 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 594 | 1.3E-60 | - |
| SMART | SM00220 | serkin_6 | 305 | 574 | 8.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 595 | 34.98661 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 424 | 436 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 2.35E-267 |
| RefSeq | XP_025812263.1 | LRR receptor kinase SERL2-like isoform X3 [Panicum hallii] | 0 |
| Q9FP13 | LRR receptor kinase SERL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERL2 PE=1 SV=1 | 1.05E-303 | |
| TrEMBL | A0A1E5VSB3 | Protein NSP-INTERACTING KINASE 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0010976 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology