Basic Information
Locus ID:
CH06.1251
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 11462507 | 11465572 | - | CH06.1251 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 104,658.14 Da | 38.06 | 104.61 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 805 | 898 | 3.0E-13 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 695 | 779 | 2.2E-8 | IPR001245 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 285 | 325 | 2.7E-6 | IPR025875 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 684 | 972 | 2.73E-47 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 367 | 613 | 1.6E-48 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 96 | 446 | 3.77E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 355 | 623 | 6.8E-72 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 208 | 4.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 679 | 766 | 7.2E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 802 | 965 | 3.4E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 354 | 7.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 283 | 5.0E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 284 | 307 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 331 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 499 | 523 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 354 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 571 | 593 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 356 | 380 | 150.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 960 | 21.870258 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 1.79E-87 |
| RefSeq | XP_025805550.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Panicum hallii] | 5.71E-223 |
| P0DL10 | Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays OX=4577 GN=TD1 PE=2 SV=1 | 2.67E-101 | |
| TrEMBL | A0A2S3GLZ6 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G041700 PE=3 SV=1 | 1.29E-221 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg6359 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049210 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1200.V1.1 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020657 |
| Poaceae | Echinochloa crus-galli | 2 | CH01.3016, CH06.1251 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G043200, gene-BS78_K002900 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G890400 |
| Poaceae | Triticum aestivum | 1 | TraesCSU02G171600.1.cds1 |