Basic Information
Locus ID:
CH06.1213
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH06 | 10935250 | 10942161 | - | CH06.1213 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 178,317.88 Da | 46.67 | 76.69 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1327 | 1590 | 3.77589E-141 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 272 | 537 | 8.95218E-126 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1535 | 1589 | 3.1E-7 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 289 | 534 | 1.5E-31 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1366 | 1532 | 9.7E-33 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 333 | 503 | 1.33E-36 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1326 | 1590 | 5.89E-80 | - |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 287 | 523 | 2.87E-5 | IPR027410 |
| Gene3D | G3DSA:3.30.810.10 | - | 1448 | 1591 | 3.6E-43 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1285 | 1447 | 5.5E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 332 | 503 | 8.0E-48 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1298 | 1591 | 8.4E-115 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1266 | 1590 | 60.556232 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 127 | - | - |
| Coils | Coil | Coil | 897 | 917 | - | - |
| Coils | Coil | Coil | 380 | 400 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_034588971.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Setaria viridis] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6UYY7 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Setaria viridis OX=4556 GN=SEVIR_4G115500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology