Basic Information
Locus ID:
CH05.89
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 653716 | 656686 | - | CH05.89 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.75 | 34,975.17 Da | 33.79 | 98.44 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 9 | 300 | 1.3E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 303 | 9.98E-93 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 94 | 7.1E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 96 | 307 | 1.4E-68 | - |
| SMART | SM00220 | serkin_6 | 9 | 300 | 5.8E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 300 | 43.749691 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54180.1 | cyclin-dependent kinase B1;1. Arabidopsis homolog of yeast cdc2, a protein kinase (cyclin-dependent kinase) that plays a central role in control of the mitotic cell cycle. | 2.1E-174 |
| RefSeq | XP_004977405.1 | cyclin-dependent kinase B1-1 [Setaria italica] | 1.74E-222 |
| Q8L4P8 | Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB1-1 PE=2 SV=1 | 4.32E-201 | |
| TrEMBL | K3Y8X8 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101780618 PE=3 SV=1 | 3.94E-221 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology