Basic Information
Locus ID:
CH05.706
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 5457826 | 5466182 | - | CH05.706 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 139,700.73 Da | 50.87 | 65.66 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00043 | CYCLIN | 348 | 418 | 2.27407E-5 | IPR013763 |
| CDD | cd05574 | STKc_phototropin_like | 888 | 1267 | 2.63363E-170 | - |
| CDD | cd00043 | CYCLIN | 251 | 340 | 1.08268E-24 | IPR013763 |
| Pfam | PF00069 | Protein kinase domain | 1135 | 1244 | 6.3E-20 | IPR000719 |
| Pfam | PF00134 | Cyclin, N-terminal domain | 221 | 347 | 1.1E-44 | IPR006671 |
| Pfam | PF02984 | Cyclin, C-terminal domain | 350 | 418 | 4.2E-16 | IPR004367 |
| Pfam | PF00069 | Protein kinase domain | 890 | 1042 | 2.0E-35 | IPR000719 |
| SUPERFAMILY | SSF47954 | Cyclin-like | 327 | 409 | 8.51E-18 | IPR036915 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 874 | 1266 | 1.77E-78 | IPR011009 |
| SUPERFAMILY | SSF47954 | Cyclin-like | 210 | 347 | 1.17E-48 | IPR036915 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 974 | 1040 | 2.8E-50 | - |
| Gene3D | G3DSA:1.10.472.10 | - | 235 | 348 | 5.8E-78 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 888 | 973 | 2.8E-50 | - |
| Gene3D | G3DSA:1.10.472.10 | - | 221 | 424 | 5.8E-78 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1131 | 1262 | 4.8E-35 | - |
| SMART | SM00385 | cyclin_7 | 354 | 442 | 4.6E-7 | IPR013763 |
| SMART | SM00220 | serkin_6 | 889 | 1244 | 7.7E-85 | IPR000719 |
| SMART | SM00385 | cyclin_7 | 257 | 341 | 1.9E-26 | IPR013763 |
| SMART | SM01332 | Cyclin_C_2 | 350 | 488 | 2.4E-13 | IPR004367 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 889 | 1244 | 43.834492 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1011 | 1023 | - | IPR008271 |
| ProSitePatterns | PS00292 | Cyclins signature. | 252 | 283 | - | IPR006671 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 784 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1275 | 1305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1104 | 1123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 820 | 864 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 631 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 666 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 824 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 734 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 750 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12690.1 | AGC kinase 1.5. Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes. | 5.97E-182 |
| RefSeq | XP_039798770.1 | serine/threonine-protein kinase RHS3-like [Panicum virgatum] | 2.48E-296 |
| Q9LTW5 | Serine/threonine-protein kinase AGC1-5 OS=Arabidopsis thaliana OX=3702 GN=AGC1-5 PE=1 SV=1 | 5.74E-181 | |
| TrEMBL | A0A3L6SZS8 | Cyclin-A1-4-like isoform X2 OS=Panicum miliaceum OX=4540 GN=C2845_PM05G08720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||