Basic Information
Locus ID:
CH05.656
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 5076750 | 5079090 | + | CH05.656 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.70 | 82,790.23 Da | 36.45 | 72.16 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 493 | 525 | 1.5E-6 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 562 | 580 | 0.01 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 146 | 669 | 4.71E-26 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 424 | 701 | 7.5E-26 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 141 | 350 | 1.0E-9 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 8.03E-106 |
| RefSeq | XP_025808443.1 | uncharacterized protein LOC112886690 [Panicum hallii] | 0 |
| TrEMBL | A0A1E5WKQ0 | Protein TolB OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000999 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology