Basic Information
Locus ID:
CH05.654
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 5058583 | 5061884 | + | CH05.654 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 82,774.09 Da | 36.60 | 71.06 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 580 | 608 | 0.16 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 193 | 668 | 2.35E-26 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 171 | 374 | 2.1E-12 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 458 | 729 | 2.3E-20 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025809293.1 | uncharacterized protein LOC112887363 [Panicum hallii] | 0 |
| TrEMBL | A0A3L6T1X2 | Peptidase_S9 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G08240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology