Basic Information
Locus ID:
CH05.609
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 4706050 | 4707340 | + | CH05.609 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 31,393.74 Da | 59.86 | 77.87 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 46 | 169 | 3.4E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 176 | 1.28E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 39 | 217 | 9.4E-33 | - |
| SMART | SM00220 | serkin_6 | 1 | 254 | 6.4E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 238 | 20.032837 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73690.1 | cyclin-dependent kinase D1;1. cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation. | 4.06E-16 |
| RefSeq | XP_025803364.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 5.74E-84 |
| Q9TTK0 | Cyclin-dependent kinase-like 2 OS=Oryctolagus cuniculus OX=9986 GN=CDKL2 PE=2 SV=1 | 3.9E-19 | |
| TrEMBL | A0A2T7EQE8 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G193500 PE=4 SV=1 | 1.3E-82 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology