Basic Information
Locus ID:
CH05.607
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 4693640 | 4696511 | + | CH05.607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 62,662.67 Da | 45.16 | 87.19 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 81 | 339 | 1.90172E-133 | - |
| Pfam | PF13499 | EF-hand domain pair | 462 | 518 | 1.7E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 386 | 446 | 2.0E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 82 | 340 | 3.0E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 79 | 346 | 8.63E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 370 | 518 | 2.11E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 168 | 347 | 4.2E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 84 | 167 | 9.4E-26 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 348 | 520 | 9.3E-50 | - |
| SMART | SM00220 | serkin_6 | 82 | 340 | 2.6E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 459 | 487 | 0.057 | IPR002048 |
| SMART | SM00054 | efh_1 | 387 | 415 | 2.1E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 423 | 451 | 0.72 | IPR002048 |
| SMART | SM00054 | efh_1 | 492 | 520 | 1.5E-4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 340 | 47.763744 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 419 | 454 | 8.404312 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 383 | 418 | 15.099209 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 493 | 523 | 11.807551 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 455 | 490 | 14.178661 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 432 | 444 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 202 | 214 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 396 | 408 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 88 | 111 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 501 | 513 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 468 | 480 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 1.64E-234 |
| RefSeq | XP_004960751.1 | calcium-dependent protein kinase 29 [Setaria italica] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | K3Z4Z7 | Calcium-dependent protein kinase 30 OS=Setaria italica OX=4555 GN=101761711 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology