halophFGD

Basic Information

Locus ID: CH05.584

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH05	4530514	4531307	-	CH05.584

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
11.38	25,711.52 Da	75.42	57.39	-0.72

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	1	22	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	47	68	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	95	133	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_004960769.1	uncharacterized protein LOC101769844 [Setaria italica]	2.63E-25
TrEMBL	A0A811RJV9	F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS53546 PE=4 SV=1	3.77E-26

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	3	BH05.512, BH05.518, CH05.584
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_2BG0164990, gene-QOZ80_5AG0380930 ... gene-QOZ80_5AG0385220, gene-QOZ80_5AG0385230, gene-QOZ80_5AG0385330, gene-QOZ80_5AG0385340, gene-QOZ80_5AG0385350, gene-QOZ80_5BG0428070, gene-QOZ80_5BG0432410, gene-QOZ80_5BG0432430
Poaceae	Sporobolus alterniflorus	1	Chr06G025820