Basic Information
Locus ID:
CH05.579
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 4501405 | 4506343 | + | CH05.579 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 104,130.31 Da | 42.06 | 90.61 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 646 | 913 | 3.58494E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 644 | 843 | 1.9E-45 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 399 | 9.18E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 626 | 913 | 6.01E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 610 | 715 | 9.8E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 716 | 920 | 6.2E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 235 | 9.6E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 236 | 445 | 1.7E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 181 | 5.7E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 640 | 914 | 3.5E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 640 | 914 | 37.375256 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 646 | 668 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 760 | 772 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 918 | 963 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 4.24E-269 |
| RefSeq | XP_004960772.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria italica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 4.08E-268 | |
| TrEMBL | K3Z3J1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101770919 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology