Basic Information
Locus ID:
CH05.4478
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 51725355 | 51725879 | - | CH05.4478 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 17,481.42 Da | 45.55 | 64.54 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 25 | 174 | 3.01157E-77 | - |
| Pfam | PF00314 | Thaumatin family | 29 | 133 | 6.5E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 22 | 174 | 4.84E-57 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 144 | 174 | 8.9E-7 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 23 | 143 | 3.2E-46 | IPR037176 |
| SMART | SM00205 | tha2 | 25 | 174 | 4.5E-45 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 146 | 1.1E-45 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 141 | 174 | 2.0E-4 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 22 | 174 | 36.621811 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 24 | 36 | 1.6E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 115 | 131 | 1.6E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 78 | 107 | 1.6E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 44 | 53 | 1.6E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 66 | 77 | 1.6E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 164 | 173 | 1.6E-44 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 1.31E-35 |
| RefSeq | XP_034584824.1 | thaumatin-like protein [Setaria viridis] | 5.03E-100 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 1.48E-91 | |
| TrEMBL | A0A811RHI9 | Thaumatin-like protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS52729 PE=4 SV=1 | 3.18E-97 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology