Basic Information
Locus ID:
CH05.4476
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 51718673 | 51719200 | + | CH05.4476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 17,899.76 Da | 36.07 | 61.49 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 27 | 174 | 2.64292E-71 | - |
| Pfam | PF00314 | Thaumatin family | 31 | 148 | 6.0E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 174 | 2.09E-53 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 147 | 175 | 1.0E-5 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 146 | 2.1E-45 | IPR037176 |
| SMART | SM00205 | tha2 | 27 | 175 | 5.2E-35 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 152 | 1.4E-44 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 144 | 175 | 0.0045 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 24 | 175 | 33.90686 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 67 | 78 | 3.2E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 116 | 132 | 3.2E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 46 | 55 | 3.2E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 26 | 38 | 3.2E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 79 | 108 | 3.2E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 165 | 174 | 3.2E-42 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 4.33E-37 |
| RefSeq | XP_039802982.1 | thaumatin-like pathogenesis-related protein 3 [Panicum virgatum] | 7.51E-99 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 3.31E-79 | |
| TrEMBL | A0A1E5WG20 | Thaumatin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002686 PE=4 SV=1 | 7.15E-105 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology