Basic Information
Locus ID:
CH05.4449
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 51431103 | 51434484 | - | CH05.4449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 54,295.18 Da | 56.92 | 77.63 | -0.56 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040382237.1 | uncharacterized protein LOC121054991 [Oryza brachyantha] | 4.82E-121 |
| TrEMBL | A0A0P0WV59 | Os06g0271500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0271500 PE=4 SV=1 | 3.89E-88 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |