Basic Information
Locus ID:
CH05.4382
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 50417713 | 50420783 | + | CH05.4382 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 84,259.21 Da | 38.41 | 81.35 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 308 | 347 | 1.85245E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 36 | 101 | 2.0E-11 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 436 | 705 | 1.9E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 418 | 708 | 8.23E-76 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 306 | 349 | 9.07E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 408 | 511 | 6.3E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 731 | 5.2E-49 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 262 | 356 | 2.5E-9 | - |
| SMART | SM00220 | serkin_6 | 436 | 708 | 3.1E-39 | IPR000719 |
| SMART | SM00179 | egfca_6 | 308 | 357 | 2.7E-6 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 308 | 355 | 8.595634 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 436 | 708 | 36.244537 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 308 | 342 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 557 | 569 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 333 | 344 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 442 | 465 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 3.92E-144 |
| RefSeq | XP_039840261.1 | wall-associated receptor kinase 2-like [Panicum virgatum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 3.79E-143 | |
| TrEMBL | A0A4U6VJ07 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G410400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology