Basic Information
Locus ID:
CH05.4368
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Amino acid permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 50244078 | 50246027 | - | CH05.4368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 62,750.04 Da | 28.91 | 101.84 | 0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 517 | 567 | 1.3E-18 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 74 | 471 | 2.1E-38 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 68 | 504 | 9.8E-92 | - |
| PIRSF | PIRSF006060 | AA_transporter | 52 | 516 | 7.3E-64 | - |
| PIRSF | PIRSF006060 | AA_transporter | 498 | 585 | 9.7 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 4.38E-245 |
| RefSeq | XP_025809104.1 | cationic amino acid transporter 1-like [Panicum hallii] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 4.2E-244 | |
| TrEMBL | A0A3L6T370 | Cationic amino acid transporter 1-like OS=Panicum miliaceum OX=4540 GN=C2845_PM05G01840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology