Basic Information
Locus ID:
CH05.4346
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 50028152 | 50029336 | + | CH05.4346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 44,262.89 Da | 53.79 | 79.77 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 9 | 48 | 1.6E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 63 | 4.58E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 47 | 9.7E-6 | - |
| SMART | SM00256 | fbox_2 | 10 | 51 | 1.1E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 51 | 9.285514 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039802822.1 | uncharacterized protein LOC120666902 isoform X1 [Panicum virgatum] | 1.36E-182 |
| TrEMBL | A0A8T0UJ47 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG285400 PE=4 SV=1 | 3.07E-181 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology