Basic Information
Locus ID:
CH05.4316
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
HMT3
Description:
betaine-homocysteine S-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 49820694 | 49822944 | + | CH05.4316 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 30,589.29 Da | 41.38 | 89.93 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 2 | 266 | 2.3E-65 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 2 | 269 | 1.57E-69 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 1 | 266 | 2.1E-86 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 1 | 267 | 42.928505 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.2 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 2.84E-135 |
| RefSeq | XP_025805597.1 | homocysteine S-methyltransferase 3 [Panicum hallii] | 9.94E-192 |
| Q9FUM8 | Homocysteine S-methyltransferase 3 OS=Zea mays OX=4577 GN=HMT-3 PE=2 SV=1 | 9.73E-185 | |
| TrEMBL | A0A2T7EJ33 | Hcy-binding domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G466200 PE=4 SV=1 | 1.58E-190 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology