Basic Information
Locus ID:
CH05.4309
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 49723082 | 49730002 | + | CH05.4309 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 89,734.66 Da | 49.54 | 73.47 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 179 | 451 | 4.22827E-107 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 174 | 451 | 2.2E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 161 | 451 | 8.34E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 279 | 460 | 1.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 163 | 254 | 2.2E-17 | - |
| SMART | SM00220 | serkin_6 | 173 | 454 | 3.3E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 173 | 454 | 40.908756 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 318 | 330 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 422 | 444 | 3.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 274 | 287 | 3.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 312 | 330 | 3.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 378 | 400 | 3.7E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 618 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 774 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 747 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 4.57E-195 |
| RefSeq | XP_039802794.1 | serine/threonine-protein kinase STY13-like isoform X1 [Panicum virgatum] | 1.03E-256 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 1.61E-171 | |
| TrEMBL | A0A3L6SXB5 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G02260 PE=4 SV=1 | 5.12E-260 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||