Basic Information
Locus ID:
CH05.4259
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 49228573 | 49230301 | + | CH05.4259 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.25 | 35,695.13 Da | 52.73 | 74.69 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 12 | 87 | 5.8E-15 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 11 | 88 | 1.37E-19 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 5 | 97 | 1.0E-23 | IPR036770 |
| SMART | SM00248 | ANK_2a | 29 | 58 | 3.1E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 61 | 90 | 0.2 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 29 | 57 | 12.832462 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 64 | 87 | 10.656889 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 64 | 93 | 10.84643 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 29 | 61 | 13.78453 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 30 | 45 | 5.0E-7 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 77 | 91 | 5.0E-7 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 147 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022681054.1 | serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Setaria italica] | 1.24E-15 |
| TrEMBL | A0A811RAY6 | ANK_REP_REGION domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50471 PE=4 SV=1 | 2.95E-15 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |