HalophFGD

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Basic Information
Locus ID: CH05.4149
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
CH05 47794244 47794582 + CH05.4149
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.63 8,729.84 Da 27.39 95.06 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 22 58 1.0E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 22 68 4.45E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 19 57 1.3E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_012699787.1 uncharacterized protein LOC101761069 [Setaria italica] 1.42E-13
TrEMBL A0A3L6SXT5 F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G03550 PE=4 SV=1 8.2E-15
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 AH05.3911, CH05.4149
Poaceae Lolium multiflorum 1 gene-QYE76_036094
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.