Basic Information
Locus ID:
CH05.4128
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 47567918 | 47570810 | - | CH05.4128 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 67,234.48 Da | 54.89 | 78.82 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 24 | 52 | 5.7E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 76 | 1.96E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 73 | 8.5E-8 | - |
| SMART | SM00256 | fbox_2 | 23 | 64 | 5.1E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 137 | 341 | 3.3E-14 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 546 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30930.1 | F-box family protein. | 2.27E-7 |
| RefSeq | XP_039841203.1 | F-box/LRR-repeat/kelch-repeat protein At1g09650-like [Panicum virgatum] | 4.47E-185 |
| P0C2D0 | Putative F-box protein At1g30930 OS=Arabidopsis thaliana OX=3702 GN=At1g30930 PE=4 SV=1 | 2.25E-6 | |
| TrEMBL | A0A3L6T3S6 | Putative F-box protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G03590 PE=4 SV=1 | 2.34E-185 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology