halophFGD

Basic Information

Locus ID: CH05.4118

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Serine/Threonine protein kinases, catalytic domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH05	47446307	47459182	-	CH05.4118

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.99	188,510.61 Da	44.31	72.64	-0.41

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	1430	1722	1.4E-60	IPR000719
Pfam	PF14111	Domain of unknown function (DUF4283)	362	480	1.4E-9	IPR025558
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1425	1724	7.15E-81	IPR011009
SUPERFAMILY	SSF56219	DNase I-like	971	1090	6.02E-15	IPR036691
Gene3D	G3DSA:3.60.10.10	Endonuclease/exonuclease/phosphatase	943	1097	3.5E-10	IPR036691
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	1417	1513	3.3E-22	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1514	1757	5.8E-60	-
SMART	SM00220	serkin_6	1430	1722	1.6E-82	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1430	1722	41.643723	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	1551	1563	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	1436	1459	-	IPR017441
MobiDBLite	mobidb-lite	consensus disorder prediction	1741	1759	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	202	223	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	488	548	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	93	272	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1733	1769	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	242	271	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1230	1251	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	889	910	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	36	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	502	534	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	812	832	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	111	126	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K08819 (cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23])

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G39420.1	CDC2C.	3.62E-144
RefSeq	XP_034587292.1	probable serine/threonine-protein kinase At1g54610 [Setaria viridis]	1.75E-232
Swiss-Prot	B5X564	Cyclin-dependent kinase C-2 C OS=Arabidopsis thaliana OX=3702 GN=CDC2C PE=1 SV=1	3.49E-143
TrEMBL	A0A4U6VWD0	Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G381400v2 PE=4 SV=1	3.96E-231

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	38	AH01.2411, AH01.4053, AH02.2969, AH03.2983, AH03.3482 ... AH04.2168, AH06.1173, AH08.999, AH09.537, BH03.2058, BH04.426, BH05.3451, BH05.741, BH08.1003, CH01.3769, CH01.5060, CH02.2241, CH02.2449, CH03.1722, CH03.3505, CH03.4729, CH03.8, CH04.1398, CH04.2284, CH04.622, CH05.1139, CH05.2408, CH05.2903, CH05.3274, CH05.4118, CH06.1882, CH08.2427, CH08.2782, CH08.766, CH09.130, CH09.3180, CH09.404, CH09.641
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0033440.1.CDS1 ... HORVU.MOREX.r3.4HG0412720.1.CDS1, HORVU.MOREX.r3.5HG0425570.1.CDS1, HORVU.MOREX.r3.7HG0667800.1.CDS1
Poaceae	Lolium multiflorum	11	gene-QYE76_001489, gene-QYE76_002749, gene-QYE76_005337 ... gene-QYE76_006069, gene-QYE76_015759, gene-QYE76_026176, gene-QYE76_026545, gene-QYE76_034785, gene-QYE76_039367, gene-QYE76_066465, gene-QYE76_067977
Poaceae	Oryza coarctata	11	Oco01G004580, Oco02G011290, Oco04G017380, Oco06G018880 ... Oco07G011460, Oco09G008340, Oco11G000620, Oco13G002610, Oco16G007020, Oco22G009350, Oco24G004440
Poaceae	Oryza sativa	2	LOC_Os04g10890.1, LOC_Os04g47030.1
Poaceae	Paspalum vaginatum	21	gene-BS78_01G375300, gene-BS78_02G114900, gene-BS78_K171700 ... gene-BS78_03G065900, gene-BS78_03G158000, gene-BS78_04G086200, gene-BS78_04G324700, gene-BS78_05G028000, gene-BS78_05G093400, gene-BS78_05G171000, gene-BS78_05G212100, gene-BS78_07G089300, gene-BS78_07G152400, gene-BS78_08G164700, gene-BS78_09G111900, gene-BS78_10G109100, gene-BS78_10G157000, gene-BS78_K215100, gene-BS78_K261200, gene-BS78_K284800, gene-BS78_K333900
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0100538, Pt_Chr0103384, Pt_Chr0200373, Pt_Chr0305788 ... Pt_Chr0504634, Pt_Chr0505848, Pt_Chr0602815, Pt_Chr0604111
Poaceae	Sporobolus alterniflorus	104	Chr01G021880, Chr01G022060, Chr02G016330, Chr02G017390 ... Chr02G020590, Chr02G025200, Chr03G003810, Chr03G006920, Chr03G008040, Chr03G012410, Chr03G013380, Chr04G009130, Chr04G015410, Chr05G007550, Chr05G021150, Chr05G024850, Chr05G030530, Chr06G000770, Chr06G019070, Chr06G019080, Chr06G023450, Chr06G024050, Chr06G025660, Chr06G031580, Chr07G008660, Chr07G016630, Chr07G018320, Chr07G018470, Chr07G023170, Chr08G013330, Chr08G018100, Chr09G007850, Chr09G011380, Chr0G006060, Chr10G013700, Chr10G020240, Chr11G016410, Chr11G018670, Chr11G018680, Chr12G015200, Chr12G026390, Chr12G033140, Chr13G004490, Chr13G014980, Chr13G018070, Chr14G006840, Chr14G007730, Chr14G009620, Chr15G007310, Chr15G016590, Chr15G018160, Chr16G002280, Chr16G003750, Chr16G012450, Chr16G013450, Chr17G005410, Chr17G006200, Chr17G014260, Chr18G004510, Chr18G007630, Chr20G004680, Chr20G005800, Chr20G006250, Chr20G009020, Chr21G011550, Chr21G012860, Chr22G003720, Chr22G003730, Chr22G011380, Chr22G011930, Chr22G012430, Chr23G015670, Chr23G017930, Chr23G019440, Chr24G005360, Chr24G007250, Chr24G008440, Chr25G009660, Chr25G014270, Chr25G014330, Chr25G015030, Chr26G003910, Chr27G001640, Chr27G001650, Chr27G001920, Chr27G003410, Chr27G007890, Chr28G006730, Chr28G009700, Chr29G006940, Chr29G011740, Chr29G011750, Chr30G010560, Chr30G011210, Chr30G015190, Chr30G015840, Chr30G015850, Chr31G002250, Chr31G002260, Chr31G003120, Chr31G003160, Chr31G004970, Chr31G005210, Chr31G006250
Poaceae	Triticum aestivum	2	TraesCS1D02G347600.1.cds1, TraesCS3A02G333800.1
Poaceae	Zea mays	29	Zm00001eb029240_P001, Zm00001eb050450_P001 ... Zm00001eb054780_P001, Zm00001eb059440_P001, Zm00001eb087850_P001, Zm00001eb091020_P001, Zm00001eb099660_P001, Zm00001eb107790_P001, Zm00001eb112050_P001, Zm00001eb112190_P002, Zm00001eb118380_P001, Zm00001eb118390_P001, Zm00001eb131610_P001, Zm00001eb133620_P001, Zm00001eb158410_P001, Zm00001eb195810_P002, Zm00001eb235030_P001, Zm00001eb235540_P001, Zm00001eb250840_P001, Zm00001eb261750_P001, Zm00001eb261780_P001, Zm00001eb292070_P001, Zm00001eb311130_P001, Zm00001eb324580_P001, Zm00001eb356800_P001, Zm00001eb357400_P001, Zm00001eb388420_P001, Zm00001eb408840_P001, Zm00001eb416460_P001