Basic Information
Locus ID:
CH05.3954
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Stress-induced protein Di19, C-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 45620178 | 45625333 | + | CH05.3954 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 24,718.17 Da | 51.72 | 72.93 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14571 | Stress-induced protein Di19, C-terminal | 128 | 217 | 1.4E-15 | IPR027935 |
| Pfam | PF05605 | Drought induced 19 protein (Di19), zinc-binding | 55 | 105 | 3.9E-16 | IPR008598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 198 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56280.1 | drought-induced 19. Encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The increase in transcript level is independent from abscisic acid level. Sequence is not similar to any protein of known function. It appears to be a member of plant-specific gene family. It's phosphorylated by AtCPK11 in a Ca(2+)-dependent manner at Thr105 and Ser107 within the AtDi19 bipartite nuclear localization signal | 4.8E-19 |
| RefSeq | XP_034588111.1 | protein DEHYDRATION-INDUCED 19 homolog 2-like [Setaria viridis] | 4.96E-112 |
| Q39083 | Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana OX=3702 GN=DI19-1 PE=1 SV=2 | 1.34E-19 | |
| TrEMBL | A0A1E5W9L5 | Protein DEHYDRATION-INDUCED 19-like protein 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0004888 PE=3 SV=1 | 5.97E-111 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology