Basic Information
Locus ID:
CH05.3750
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 42938141 | 42945998 | + | CH05.3750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 110,958.26 Da | 67.22 | 56.19 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 789 | 845 | 1.6E-23 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 946 | 1003 | 4.8E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 937 | 1005 | 7.85E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 787 | 847 | 6.8E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 930 | 1006 | 6.7E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 774 | 848 | 4.2E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 945 | 1004 | 7.0E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 788 | 846 | 2.5E-34 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 940 | 1005 | 37.412945 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 789 | 847 | 23.192444 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 925 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 898 | 920 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 855 | 876 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1011 | 1038 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1038 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 70 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 3.13E-98 |
| RefSeq | XP_004962924.1 | probable WRKY transcription factor 3 [Setaria italica] | 1.41E-280 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 3.03E-97 | |
| TrEMBL | A0A1E5W542 | Putative WRKY transcription factor 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006448 PE=4 SV=1 | 3.16E-283 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology