Basic Information
Locus ID:
CH05.3734
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 42706261 | 42711769 | + | CH05.3734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.29 | 74,657.42 Da | 80.55 | 64.31 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 591 | 608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 350 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039841194.1 | probable ubiquitin-conjugating enzyme E2 23 [Panicum virgatum] | 6.64E-16 |
| TrEMBL | A0A1E5VGN7 | Putative ubiquitin-conjugating enzyme E2 24 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0014767 PE=4 SV=1 | 3.42E-37 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 15 | AH05.1035, BH05.1090, BH05.3569, BH05.3573, BH05.3575 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_5AG0399110, gene-QOZ80_5AG0399230 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_014680, gene-QYE76_032195, gene-QYE76_061273 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G032900 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G009630 |