Basic Information
Locus ID:
CH05.3629
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 40782628 | 40796863 | + | CH05.3629 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 310,996.19 Da | 50.18 | 80.55 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 1804 | 1869 | 9.3E-14 | IPR025312 |
| Pfam | PF13963 | Transposase-associated domain | 830 | 903 | 5.7E-18 | IPR029480 |
| Pfam | PF02992 | Transposase family tnp2 | 1147 | 1360 | 4.4E-91 | IPR004242 |
| Pfam | PF00931 | NB-ARC domain | 383 | 577 | 2.5E-32 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 19 | 302 | 5.4E-47 | IPR000719 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 1544 | 1650 | 8.1E-38 | IPR025452 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 374 | 578 | 1.5E-37 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 650 | 788 | 5.1E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 304 | 2.6E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 313 | 9.0E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 682 | 797 | 1.1E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 92 | 1.3E-20 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 365 | 531 | 1.3E-28 | IPR027417 |
| SMART | SM00220 | serkin_6 | 18 | 302 | 2.0E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 305 | 36.612019 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 725 | 746 | 7.373124 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 46 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 156 | 168 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 721 | 737 | 6.7E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 404 | 419 | 6.7E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 475 | 489 | 6.7E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2197 | 2223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1871 | 1892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2550 | 2573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 960 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2076 | 2104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2201 | 2215 | - | - |
| Coils | Coil | Coil | 2501 | 2535 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67520.5 | - | 9.12E-51 |
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| O64793 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana OX=3702 GN=At1g67520 PE=2 SV=3 | 2.43E-48 | |
| TrEMBL | Q2QQL4 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g30630 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |