Basic Information
Locus ID:
CH05.3489
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 37610051 | 37617706 | + | CH05.3489 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 129,242.59 Da | 39.75 | 84.36 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 291 | 321 | 3.10809E-8 | - |
| Pfam | PF00069 | Protein kinase domain | 476 | 638 | 3.4E-26 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 28 | 80 | 1.1E-8 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 402 | 469 | 6.5E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 649 | 1.12E-61 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 290 | 323 | 5.1E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 460 | 5.5E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 663 | 1.6E-53 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 242 | 329 | 5.2E-11 | - |
| SMART | SM00181 | egf_5 | 294 | 333 | 13.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 291 | 333 | 2.2E-6 | IPR001881 |
| SMART | SM00220 | serkin_6 | 398 | 644 | 2.8E-20 | IPR000719 |
| SMART | SM00181 | egf_5 | 242 | 290 | 29.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 398 | 644 | 30.152782 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 496 | 508 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 291 | 316 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 404 | 428 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 870 | 905 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 905 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 890 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 2.47E-105 |
| RefSeq | XP_025809058.1 | wall-associated receptor kinase 2-like [Panicum hallii] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 2.4E-104 | |
| TrEMBL | A0A811MBS6 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS2610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology