Basic Information
Locus ID:
CH05.3192
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 30600194 | 30609492 | - | CH05.3192 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 114,999.85 Da | 36.25 | 88.19 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 710 | 977 | 3.70218E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 708 | 920 | 2.4E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 1005 | 4.51E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 152 | 500 | 3.06E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 123 | 283 | 1.0E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 382 | 2.7E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 780 | 993 | 6.9E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 383 | 510 | 5.4E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 779 | 2.1E-33 | - |
| SMART | SM00220 | serkin_6 | 704 | 983 | 1.3E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 978 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 824 | 836 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 732 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 5.45E-235 |
| RefSeq | XP_034587246.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria viridis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 2.91E-205 | |
| TrEMBL | A0A4U6VTH9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G299800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology