HalophFGD

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Basic Information
Locus ID: CH05.2953
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Dienelactone hydrolase family
Maps and Mapping Data
Chromosome Start End Strand ID
CH05 26374520 26377895 - CH05.2953
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.86 60,705.32 Da 43.31 93.57 -0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 374 423 5.2E-5 IPR005174
MobiDBLite mobidb-lite consensus disorder prediction 1 35 - -
MobiDBLite mobidb-lite consensus disorder prediction 18 32 - -
KEGG Pathway
KO Term:
K14515 (EIN3-binding F-box protein)
Pathway:
ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant) ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_004967313.1 uncharacterized protein LOC101759482 [Setaria italica] 7.44E-158
TrEMBL A0A3B6QJ05 DUF295 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 6.45E-186
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH05.1595, AH05.2825, AH09.1187, BH05.1751, CH04.2131 ...
CH05.2953, CH09.1408
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_2BG0160850
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.6HG0616380.1.CDS1 ...
HORVU.MOREX.r3.6HG0621100.1.CDS1
Poaceae Oryza coarctata 1 Oco04G014900
Poaceae Oryza sativa 1 LOC_Os08g18870.1
Poaceae Puccinellia tenuiflora 4 Pt_Chr0301262, Pt_Chr0306832, Pt_Chr0306837, Pt_Chr0502826
Poaceae Triticum aestivum 4 TraesCS6A02G341300.1.cds1, TraesCS6B02G372700.1.cds1 ...
TraesCS6B02G372800.1.cds1, TraesCS6D02G321500.1.cds1
Poaceae Zoysia japonica 1 nbis-gene-12384
Poaceae Zoysia macrostachya 1 Zma_g25684
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.