Basic Information
Locus ID:
CH05.2891
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 25313160 | 25315019 | - | CH05.2891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 66,583.90 Da | 62.41 | 81.58 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 288 | 495 | 2.12E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 49 | 3.66E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 518 | 2.5E-8 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 262 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 2.64E-6 |
| RefSeq | XP_039840991.1 | uncharacterized protein LOC120700840 [Panicum virgatum] | 7.64E-214 |
| TrEMBL | A0A8T0V5J5 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG228969 PE=4 SV=1 | 1.73E-212 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology