Basic Information
Locus ID:
CH05.2682
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
gene silencing by RNA
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 22665496 | 22666911 | - | CH05.2682 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.58 | 31,892.06 Da | 57.25 | 63.95 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 265 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039833150.1 | putative disease resistance protein RGA1 [Panicum virgatum] | 2.55E-19 |
| TrEMBL | B8BK71 | Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35901 PE=4 SV=1 | 2.72E-21 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 30 | AH02.2831, AH03.661, AH04.1103, AH04.216, AH04.458, BH01.627 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_053643, gene-QYE76_056610 |