Basic Information
Locus ID:
CH05.2649
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
FAD NAD(P)-binding oxidoreductase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 22290461 | 22298388 | + | CH05.2649 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 78,189.42 Da | 43.61 | 84.54 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00890 | FAD binding domain | 350 | 422 | 4.8E-6 | IPR003953 |
| Pfam | PF01494 | FAD binding domain | 237 | 274 | 5.2E-5 | IPR002938 |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | 236 | 694 | 2.18E-35 | IPR036188 |
| Gene3D | G3DSA:3.30.70.2700 | - | 89 | 177 | 1.1E-5 | - |
| Gene3D | G3DSA:3.50.50.60 | - | 227 | 453 | 2.8E-77 | IPR036188 |
| Gene3D | G3DSA:3.50.50.60 | - | 637 | 699 | 2.6E-9 | IPR036188 |
| PRINTS | PR00419 | Adrenodoxin reductase family signature | 237 | 259 | 1.3E-5 | - |
| PRINTS | PR00419 | Adrenodoxin reductase family signature | 404 | 418 | 1.3E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 92 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30720.1 | FAD/NAD(P)-binding oxidoreductase family protein. Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth. | 8.95E-298 |
| RefSeq | XP_034587029.1 | uncharacterized protein Cbei_0202 [Setaria viridis] | 0 |
| Q05627 | Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=Cbei_0202 PE=4 SV=2 | 4.73E-105 | |
| TrEMBL | A0A4U6VH19 | FAD_binding_3 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G248800v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg4012 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_10883 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014937 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_8g191510, BVRB_8g191520 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg24767, Sbi_jg8631 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19974 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022294 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl42639, Sgl42650, Sgl47384 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009308, gene:ENSEOMG00000032281 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0017100, CQ.Regalona.r1.8BG0018150 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30264900 |
| Apiaceae | Apium graveolens | 1 | Ag2G00394 |
| Arecaceae | Cocos nucifera | 1 | scaffold000539G000050 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103720589, gene-LOC120109602 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.23.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G24652 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G30720.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10024548m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g28630.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g084990.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2600 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2749 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g08610 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g24970 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.346 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00000788, Pov_00041633 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G07324, Lb1G07325 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.2457, BH05.2553, CH05.2649 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0373260, gene-QOZ80_5BG0420540 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0065010.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_013265 |
| Poaceae | Oryza coarctata | 1 | Oco09G009560 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g34040.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G143700 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0505088, Pt_Chr0505228 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G009310, Chr22G008390 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G425900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG038550, gene_TRIDC1BG043750 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G258000.1, TraesCS1B02G268400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb288040_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-13925 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g27209 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.2581, evm.TU.LG02.2582 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g18990 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.178 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13409 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-21241 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16604 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.116 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015004 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16652 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14563 |
| Salicaceae | Populus euphratica | 1 | populus_peu05559 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132602934 |
| Solanaceae | Solanum chilense | 1 | SOLCI004192200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107026340 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_8168 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1021 |
| Zosteraceae | Zostera marina | 1 | Zosma03g12780.v3.1 |