Basic Information
Locus ID:
CH05.2507
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 20860900 | 20863563 | + | CH05.2507 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 58,012.68 Da | 44.41 | 91.14 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 203 | 477 | 3.058E-104 | - |
| Pfam | PF00069 | Protein kinase domain | 200 | 474 | 1.8E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 179 | 479 | 8.92E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 281 | 487 | 1.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 180 | 280 | 7.9E-30 | - |
| SMART | SM00220 | serkin_6 | 197 | 476 | 4.4E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 484 | 38.067822 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 327 | 339 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 203 | 225 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 79 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 6.25E-186 |
| RefSeq | XP_004961961.1 | probable serine/threonine-protein kinase At1g01540 [Setaria italica] | 8.19E-310 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 6.0E-185 | |
| TrEMBL | K3Z5G8 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101761998 PE=4 SV=1 | 1.85E-308 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology