Basic Information
Locus ID:
CH05.2315
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK13
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 19076809 | 19080794 | + | CH05.2315 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 60,355.16 Da | 41.87 | 83.83 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 66 | 324 | 2.8532E-134 | - |
| CDD | cd00051 | EFh | 444 | 506 | 1.34996E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 443 | 506 | 3.2E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 371 | 431 | 1.1E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 67 | 325 | 5.3E-73 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 353 | 531 | 6.96E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 65 | 332 | 2.7E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 333 | 4.0E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 152 | 2.1E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 334 | 509 | 1.6E-53 | - |
| SMART | SM00054 | efh_1 | 480 | 508 | 9.3E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 67 | 325 | 3.3E-96 | IPR000719 |
| SMART | SM00054 | efh_1 | 408 | 436 | 1.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 372 | 400 | 1.4E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 444 | 472 | 8.4E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 368 | 403 | 16.18713 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 325 | 47.099449 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 476 | 511 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 440 | 475 | 14.597092 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 381 | 393 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 73 | 96 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 489 | 501 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 453 | 465 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 2.49E-310 |
| RefSeq | XP_039800613.1 | calcium-dependent protein kinase 16 [Panicum virgatum] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T0UE16 | Calcium-dependent protein kinase 13 OS=Panicum virgatum OX=38727 GN=PVAP13_3NG079746 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology